3.3 Sequence Numbers
The segment length (SEG.LEN) includes both data and sequence space occupying controls. When a SYN is present then SEG.SEQ is the sequence number of the SYN.
High-resolution mapping of copy-number alterations with massively ...
Here we present: (i) a statistical analysis of the power to detect copy-number alterations of a given size; (ii) SegSeq, an algorithm to segment equal copy ...
Comparative analysis of methods for identifying somatic copy ...
5 мар. 2014 г. ... ... SegSeq [14], COPS [20], CNAseg [21] and rSW-seq [28] for WGS data, ExomeCNV [22], VarScan2 [23], ADTEx [24, 25] and an unnamed algorithm [29] ...
Copy number variation detection using next generation sequencing ...
14 апр. 2014 г. ... Sliding window methods include Segseq by Chiang et al. [14], Event-wise testing by Yoon et al. [15], rSW-seq by Kim et al. [16] and JointSLM ...
Genetic and Clonal Dissection of Murine Small Cell Lung ...
13 мар. 2014 г. ... (A) CNA heatmap for PRPt mSCLC tumors analyzed by SegSeq. (B) GISTIC results for recurrent CNAs. Note the absence of Chr19 deletion and presence ...
SegSeq · bio.tools
An algorithm to identify chromosomal breakpoints using massively parallel sequence data.
samples/advertising/rsgemt/lib/rafxssai.brs at master · rokudev ...
... segSeq = emtBreak.availId.toInt() adBreak.id = emtBreak.availId adBreak ... segSeq and params.sequence = ab.segSeq and (ab.renderTime - params.segStartTime) ...
RFC Errata Report » RFC Editor
Section 3.2 says: 1) If the RST bit is set and the sequence number is outside the current receive window (SEG.SEQ RCV.NXT+ ...
On the Validation of TCP Sequence Numbers
>0 >0. RCV.NXT =< SEG.SEQ < RCV.NXT+RCV.WND or. RCV.NXT =< SEG.SEQ+SEG.LEN-1 < RCV.NXT+RCV.WND. RCV.NXT-1 =< SEG.SEQ < RCV.NXT+RCV.WND, or,.
Control-free calling of copy number alterations in deep-sequencing ...
We compared FREEC with three other existing tools: CNV-seq, SegSeq and RDXplorer (Supplementary Tables 1 and 4). As well as providing other additional ...